美利体育登录入口官网

位置:首页 >化学 >化学(综合) >ACCOUNTS OF CHEMICAL RESEARCH >AI-Driven Antimicrobial Peptide Discovery: Mining and Generation

美利体育登录入口官网:AI 驱动的抗菌肽发现:挖掘与生成

AI-Driven Antimicrobial Peptide Discovery: Mining and Generation

作者:Paulina Szymczak;Wojciech Zarzecki;Jiejing Wang;Yiqian Duan;Jun Wang;Luis Pedro Coelho;Cesar de la Fuente-Nunez;Ewa Szczurek;

DOI:https://doi.org/10.1021/acs.accounts.0c00594

引用量:118

发表时间:2025年

  • 文献详情
  • 相似文献

美利体育登录入口官网:摘要

点击复制部分链接 部分链接已复制!高分辨率图像 下载MS PowerPoint幻灯片 概览 日益加剧的抗微生物药物耐药性(AMR)威胁构成了重大全球卫生危机,到2050年可能取代癌症成为首要死因。传统抗生素发现方法未能跟上病原体耐药机制的快速演变,凸显了开发新型治疗策略的紧迫性。在此背景下,抗微生物肽(AMPs)因其对细菌的选择性更强、相较于传统小分子抗生素更不易诱导耐药性,成为极具前景的治疗类别。然而,由于组合序列空间庞大且需平衡疗效与低毒性,设计高效AMPs仍具挑战性。解决这一问题对于致力于开发下一代抗微生物药物的化学家及研究人员而言至关重要。人工智能(AI)为革新AMPs发现提供了强大工具。借助AI,我们可以更高效地探索庞大的序列空间,识别具有最优治疗特性的肽。本述评文章探讨AI在AMPs发现中的新兴应用,重点聚焦于两种主要策略:AMPs挖掘与AMPs生成,并介绍判别性方法作为宝贵的工具箱。AMPs挖掘涉及扫描生物序列以识别潜在的AMPs,随后利用判别模型预测这些肽的活性与毒性。该方法已成功识别众多有前景的候选者,并经实验验证,彰显了AI在AMPs设计与发现中的潜力。另一方面,AMPs生成通过生成模型从现有数据中学习,创造全新的肽序列。此类模型针对所需特性(如增强活性、降低毒性)进行优化,有可能产生超越天然肽的合成肽。尽管存在生成不现实序列的风险,生成模型仍有望加速发现高效、新颖且多样化的AMPs。在本述评中,我们阐述了基于AI方法的技術挑战与进展,讨论了整合多源数据的重要性,以及先进算法在优化肽预测中的作用。此外,我们强调了AI的未来潜力:不仅可加速发现进程,还能揭示具有前所未有的特性的肽,为下一代抗微生物疗法铺平道路。总之,AI与AMPs发现的协同作用为应对AMR开辟了新的前沿。通过驾驭AI的力量,我们可以设计出既高效又安全的新型肽,为AMR不再构成迫在眉睫威胁的未来带来希望。本文强调了其变革性的潜力


美利体育登录入口官网:Abstract

AbstractClick to copy section linkSection link copied!High Resolution ImageDownload MS PowerPoint SlideConspectusThe escalating threat of antimicrobial resistance (AMR) poses a significant global health crisis, potentially surpassing cancer as a leading cause of death by 2050. Traditional antibiotic discovery methods have not kept pace with the rapidly evolving resistance mechanisms of pathogens, highlighting the urgent need for novel therapeutic strategies. In this context, antimicrobial peptides (AMPs) represent a promising class of therapeutics due to their selectivity toward bacteria and slower induction of resistance compared to classical, small molecule antibiotics. However, designing effective AMPs remains challenging because of the vast combinatorial sequence space and the need to balance efficacy with low toxicity. Addressing this issue is of paramount importance for chemists and researchers dedicated to developing next-generation antimicrobial agents.Artificial intelligence (AI) presents a powerful tool to revolutionize AMP discovery. By leveraging AI, we can navigate the immense sequence space more efficiently, identifying peptides with optimal therapeutic properties. This Account explores the emerging application of AI in AMP discovery, focusing on two primary strategies: AMP mining, and AMP generation, as well as the use of discriminative methods as a valuable toolbox.AMP mining involves scanning biological sequences to identify potential AMPs. Discriminative models are then used to predict the activity and toxicity of these peptides. This approach has successfully identified numerous promising candidates, which were subsequently validated experimentally, demonstrating the potential of AI in AMP design and discovery.AMP generation, on the other hand, creates novel peptide sequences by learning from existing data through generative modeling. This class of models optimizes for desired properties, such as increased activity and reduced toxicity, potentially producing synthetic peptides that surpass naturally occurring ones. Despite the risk of generating unrealistic sequences, generative models hold the promise of accelerating the discovery of highly effective and highly novel and diverse AMPs.In this Account, we describe the technical challenges and advancements in these AI-based approaches. We discuss the importance of integrating various data sources and the role of advanced algorithms in refining peptide predictions. Additionally, we highlight the future potential of AI to not only expedite the discovery process but also to uncover peptides with unprecedented properties, paving the way for next-generation antimicrobial therapies.In conclusion, the synergy between AI and AMP discovery opens new frontiers in the fight against AMR. By harnessing the power of AI, we can design novel peptides that are both highly effective and safe, offering hope for a future where AMR is no longer a looming threat. Our paper underscores the transformative potential of AI in drug discovery, advocating for its continued integration into biomedical research.This publication is licensed underCC-BY 4.0 . License Summary*You are free to share(copy and redistribute) this article in any medium or format and to adapt(remix, transform, and build upon) the material for any purpose, even commercially within the parameters below: Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator.View full license *DisclaimerThis summary highlights only some of the key features and terms of the actual license. It is not a license and has no legal value. Carefully review the actual license before using these materials. License Summary*You are free to share(copy and redistribute) this article in any medium or format and to adapt(remix, transform, and build upon) the material for any purpose, even commercially within the parameters below: Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator. View full license *DisclaimerThis summary highlights only some of the key features and terms of the actual license. It is not a license and has no legal value. Carefully review the actual license before using these materials. License Summary*You are free to share(copy and redistribute) this article in any medium or format and to adapt(remix, transform, and build upon) the material for any purpose, even commercially within the parameters below: Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator. View full license *DisclaimerThis summary highlights only some of the key features and terms of the actual license. It is not a license and has no legal value. Carefully review the actual license before using these materials. ACS PublicationsCopyright ? 2025 The Authors. Published by American Chemical SocietySubjectswhat are subjects Article subjects are automatically applied from the ACS Subject Taxonomy and describe the scientific concepts and themes of the article. Antimicrobial agents Assays Bacteria Peptides and proteins Toxicity


美利体育(meili)官方网站_美利体育手机版下载